Characterization of Fungi Communities in Organic Soybean Seeds Using DNA Sequencing: Effects of Cultivar and Location

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dc.contributor.authorOlszak-Przybyś, Hanna
dc.contributor.authorPrzybyś, Marcin
dc.contributor.authorBojarszczuk, Jolanta
dc.contributor.authorKsiężak, Jerzy
dc.date.accessioned2026-03-04T13:34:19Z
dc.date.available2026-03-04T13:34:19Z
dc.date.issued2026-02
dc.description.abstractOrganic soybean seeds are susceptible to colonization by numerous fungal pathogens, which can reduce their germination capacity and nutritional quality. This study evaluated fungi transmitted by seeds and their effects on selected seed quality parameters, as well as the influence of variety, location and growing season. In total, 471 fungal isolates belonging to 24 genera and 37 species were obtained from three soybean varieties (Erica, Es Commandor and Cerez PZO) cultivated at two locations during the 2022–2023 seasons. All obtained isolates were identified based on ITS sequencing, and Fusarium isolates were further characterized to the species level using TEF and RPB2 markers. Fusarium spp. was the most frequently isolated genus, accounting for 35.7% of all isolates, followed by Alternaria spp. (15.9%) and Aspergillus spp. (11.9%). Fungal frequency and species diversity differed significantly between years. Seed germination capacity was significantly lower in 2023 than in 2022 and coincided with higher fungal colonization, lower spring temperatures, and increased rainfall. A significant negative Pearson’s correlation (r = −0.58, p < 0.05) was found between fungi abundance and seed oil content, indicating a direct impact of fungal colonization on nutritional quality. These results highlight the role of environmental conditions in seed-borne pathogen communities and the need for monitoring and seed health management to ensure soybean seed quality.
dc.description.sponsorshipThis research was funded as a part of scientific-research sub-programme 1, task 1.06 implemented in 2022–2025, within the statutory activity of the IUNG-PIB, Puławy, Poland, financed by the Polish Ministry of Science and Higher Education.
dc.identifier.citationPathogens 2026, 15, 239
dc.identifier.doi10.3390/pathogens15020239
dc.identifier.issn2076-0817
dc.identifier.urihttps://bc.iung.pl/handle/123456789/4725
dc.identifier.urihttps://www.mdpi.com/2076-0817/15/2/239
dc.language.isoen
dc.publisherMDPI
dc.subjectfungal colonization, seed-borne fungi, fungal diversity, seed quality
dc.titleCharacterization of Fungi Communities in Organic Soybean Seeds Using DNA Sequencing: Effects of Cultivar and Location
dc.typeArticle
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